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Xanespy documentation¶

Python library for analyzing X-Ray absorbance spectroscopy data.

Warning

This documentation and the code are under active development. We make every effort to ensure the code is usable, but make no guarantees.

Contents:

  • Introduction
    • Installation
    • Development
    • X-Ray Absorbance Basics
    • Example Workflow
  • Importing Data into Xanespy
    • APS Beamline 32-ID-C
    • SSRL Beamline 6-2c - Directory of XRM Files
    • Xradia Image Files (.xrm and .txrm)
    • APS Beamline 8-BM-B - Energy Stack (TXRM)
    • APS Beamline 8-BM-B - Directory of XRM Files
    • ALS Ptychography from 5.3.2.1
    • ALS Ptychography/STXM from COSMIC 7.0.1
    • APS Beamline 4-ID-XTIP - Grid Scan
  • Analyzing the Data
    • Defining an Absorbance Edge
    • Forking the Data
    • Frame Alignment
    • Median Filtering
    • Masking Data
    • Subtracting Surroundings
    • Calculating Maps
    • Fitting Spectra
  • Fitting X-ray Absorbance Spectra
    • Linear Combination Fitting
    • Shortcuts for Common Use-Cases
    • Rolling Your Own Fit Function
  • Visualization of Results
    • Plotting Maps
    • Interactive (Qt) Viewer
  • Accessing the Data Directly
  • xanespy
    • xanespy package

Indices and tables¶

  • Index
  • Module Index
  • Search Page

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